Syntax
This section of the manual describes the syntax used by Documenter to build documentation. For supported Markdown syntax, see the documentation for the Markdown standard library in the Julia manual.
@docs
block
Splice one or more docstrings into a document in place of the code block, i.e.
```@docs
Documenter
makedocs
deploydocs
```
This block type is evaluated within the CurrentModule
module if defined, otherwise within Main
, and so each object listed in the block should be visible from that module. Undefined objects will raise warnings during documentation generation and cause the code block to be rendered in the final document unchanged.
Objects may not be listed more than once within the document. When duplicate objects are detected an error will be raised and the build process will be terminated.
To ensure that all docstrings from a module are included in the final document the modules
keyword for makedocs
can be set to the desired module or modules, i.e.
makedocs(
modules = [Documenter],
)
which will cause any unlisted docstrings to raise warnings when makedocs
is called. If modules
is not defined then no warnings are printed, even if a document has missing docstrings.
@autodocs
block
Automatically splices all docstrings from the provided modules in place of the code block. This is equivalent to manually adding all the docstrings in a @docs
block.
```@autodocs
Modules = [Foo, Bar]
Order = [:function, :type]
```
The above @autodocs
block adds all the docstrings found in modules Foo
and Bar
that refer to functions or types to the document.
Each module is added in order and so all docs from Foo
will appear before those of Bar
. Possible values for the Order
vector are
:module
:constant
:type
:function
:macro
If no Order
is provided then the order listed above is used.
When a potential docstring is found in one of the listed modules, but does not match any value from Order
then it will be omitted from the document. Hence Order
acts as a basic filter as well as sorter.
In addition to Order
, a Pages
vector may be included in @autodocs
to filter docstrings based on the source file in which they are defined:
```@autodocs
Modules = [Foo]
Pages = ["a.jl", "b.jl"]
```
In the above example docstrings from module Foo
found in source files that end in a.jl
and b.jl
are included. The page order provided by Pages
is also used to sort the docstrings. Note that page matching is done using the end of the provided strings and so a.jl
will be matched by any source file that ends in a.jl
, i.e. src/a.jl
or src/foo/a.jl
.
To filter out certain docstrings by your own criteria, you can provide function with them Filter
keyword:
```@autodocs
Modules = [Foo]
Filter = t -> typeof(t) === DataType && t <: Foo.C
```
In the given example, only the docstrings of the subtypes of Foo.C
are shown. Instead of an anonymous function you can give the name of a function you defined beforehand, too:
```@autodocs
Modules = [Foo]
Filter = myCustomFilterFunction
```
To include only the exported names from the modules listed in Modules
use Private = false
. In a similar way Public = false
can be used to only show the unexported names. By default both of these are set to true
so that all names will be shown.
Functions exported from `Foo`:
```@autodocs
Modules = [Foo]
Private = false
Order = [:function]
```
Private types in module `Foo`:
```@autodocs
Modules = [Foo]
Public = false
Order = [:type]
```
When more complex sorting is needed then use @docs
to define it explicitly.
@ref
link
Used in markdown links as the URL to tell Documenter to generate a cross-reference automatically. The text part of the link can be a docstring, header name, or GitHub PR/Issue number.
# Syntax
... [`makedocs`](@ref) ...
# Functions
```@docs
makedocs
```
... [Syntax](@ref) ...
... [#42](@ref) ...
Plain text in the "text" part of a link will either cross-reference a header, or, when it is a number preceded by a #
, a GitHub issue/pull request. Text wrapped in backticks will cross-reference a docstring from a @docs
block.
@ref
s may refer to docstrings or headers on different pages as well as the current page using the same syntax.
Note that depending on what the CurrentModule
is set to, a docstring @ref
may need to be prefixed by the module which defines it.
Duplicate Headers
In some cases a document may contain multiple headers with the same name, but on different pages or of different levels. To allow @ref
to cross-reference a duplicate header it must be given a name as in the following example
# [Header](@id my_custom_header_name)
...
## Header
... [Custom Header](@ref my_custom_header_name) ...
The link that wraps the named header is removed in the final document. The text for a named @ref ...
does not need to match the header that it references. Named @ref ...
s may refer to headers on different pages in the same way as unnamed ones do.
Duplicate docstring references do not occur since splicing the same docstring into a document more than once is disallowed.
Named doc @ref
s
Docstring @ref
s can also be "named" in a similar way to headers as shown in the Duplicate Headers section above. For example
module Mod
"""
Both of the following references point to `g` found in module `Main.Other`:
* [`Main.Other.g`](@ref)
* [`g`](@ref Main.Other.g)
"""
f(args...) = # ...
end
This can be useful to avoid having to write fully qualified names for references that are not imported into the current module, or when the text displayed in the link is used to add additional meaning to the surrounding text, such as
Use [`for i = 1:10 ...`](@ref for) to loop over all the numbers from 1 to 10.
Named doc @ref
s should be used sparingly since writing unqualified names may, in some cases, make it difficult to tell which function is being referred to in a particular docstring if there happen to be several modules that provide definitions with the same name.
@meta
block
This block type is used to define metadata key/value pairs that can be used elsewhere in the page. Currently recognised keys:
CurrentModule
: module where Documenter evaluates, for example,@docs
-block and@ref
-links.DocTestSetup
: code to be evaluated before a doctest, see the Setup Code section under Doctests.DocTestFilters
: filters to deal with, for example, unpredictable output from doctests, see the Filtering Doctests section under Doctests.EditURL
: link to where the page can be edited. This defaults to the.md
page itself, but if the source is something else (for example if the.md
page is generated as part of the doc build) this can be set, either as a local link, or an absolute url.
Example:
```@meta
CurrentModule = FooBar
DocTestSetup = quote
using MyPackage
end
DocTestFilters = [r"Stacktrace:[\s\S]+"]
EditURL = "link/to/source/file"
```
Note that @meta
blocks are always evaluated in Main
.
@index
block
Generates a list of links to docstrings that have been spliced into a document. Valid settings are Pages
, Modules
, and Order
. For example:
```@index
Pages = ["foo.md"]
Modules = [Foo, Bar]
Order = [:function, :type]
```
When Pages
or Modules
are not provided then all pages or modules are included. Order
defaults to
[:module, :constant, :type, :function, :macro]
if not specified. Order
and Modules
behave the same way as in @autodocs
blocks and filter out docstrings that do not match one of the modules or categories specified.
Note that the values assigned to Pages
, Modules
, and Order
may be any valid Julia code and thus can be something more complex that an array literal if required, i.e.
```@index
Pages = map(file -> joinpath("man", file), readdir("man"))
```
It should be noted though that in this case Pages
may not be sorted in the order that is expected by the user. Try to stick to array literals as much as possible.
@contents
block
Generates a nested list of links to document sections. Valid settings are Pages
and Depth
.
```@contents
Pages = ["foo.md"]
Depth = 5
```
As with @index
if Pages
is not provided then all pages are included. The default Depth
value is 2
.
@example
block
Evaluates the code block and inserts the result into the final document along with the original source code.
```@example
a = 1
b = 2
a + b
```
The above @example
block will splice the following into the final document
```julia
a = 1
b = 2
a + b
```
```
3
```
Leading and trailing newlines are removed from the rendered code blocks. Trailing whitespace on each line is also removed.
The working directory, pwd
, is set to the directory in build
where the file will be written to, and the paths in include
calls are interpreted to be relative to pwd
. This can be customized with the workdir
keyword of makedocs
.
Hiding Source Code
Code blocks may have some content that does not need to be displayed in the final document. # hide
comments can be appended to lines that should not be rendered, i.e.
```@example
import Random # hide
Random.seed!(1) # hide
A = rand(3, 3)
b = [1, 2, 3]
A \ b
```
Note that appending # hide
to every line in an @example
block will result in the block being hidden in the rendered document. The results block will still be rendered though. @setup
blocks are a convenient shorthand for hiding an entire block, including the output.
stdout
and stderr
The Julia output streams are redirected to the results block when evaluating @example
blocks in the same way as when running doctest code blocks.
nothing
Results
When the @example
block evaluates to nothing
then the second block is not displayed. Only the source code block will be shown in the rendered document. Note that if any output from either stdout
or stderr
is captured then the results block will be displayed even if nothing
is returned.
Named @example
Blocks
By default @example
blocks are run in their own anonymous Module
s to avoid side-effects between blocks. To share the same module between different blocks on a page the @example
can be named with the following syntax
```@example 1
a = 1
```
```@example 1
println(a)
```
The name can be any text, not just integers as in the example above, i.e. @example foo
.
Named @example
blocks can be useful when generating documentation that requires intermediate explanation or multimedia such as plots as illustrated in the following example
First we define some functions
```@example 1
using PyPlot # hide
f(x) = sin(2x) + 1
g(x) = cos(x) - x
```
and then we plot `f` over the interval from ``-π`` to ``π``
```@example 1
x = linspace(-π, π)
plot(x, f(x), color = "red")
savefig("f-plot.svg"); nothing # hide
```
![](f-plot.svg)
and then we do the same with `g`
```@example 1
plot(x, g(x), color = "blue")
savefig("g-plot.svg"); nothing # hide
```
![](g-plot.svg)
Note that @example
blocks are evaluated within the directory of build
where the file will be rendered . This means than in the above example savefig
will output the .svg
files into that directory. This allows the images to be easily referenced without needing to worry about relative paths.
@example
blocks automatically define ans
which, as in the Julia REPL, is bound to the value of the last evaluated expression. This can be useful in situations such as the following one where where binding the object returned by plot
to a named variable would look out of place in the final rendered documentation:
```@example
using Gadfly # hide
plot([sin, x -> 2sin(x) + x], -2π, 2π)
draw(SVG("plot.svg", 6inch, 4inch), ans); nothing # hide
```
![](plot.svg)
Delayed Execution of @example
Blocks
@example
blocks accept a keyword argument continued
which can be set to true
or false
(defaults to false
). When continued = true
the execution of the code is delayed until the next continued = false
@example
-block. This is needed for example when the expression in a block is not complete. Example:
```@example half-loop; continued = true
for i in 1:3
j = i^2
```
Some text explaining what we should do with `j`
```@example half-loop
println(j)
end
```
Here the first block is not complete – the loop is missing the end
. Thus, by setting continued = true
here we delay the evaluation of the first block, until we reach the second block. A block with continued = true
does not have any output.
@repl
block
These are similar to @example
blocks, but adds a julia>
prompt before each toplevel expression. ;
and # hide
syntax may be used in @repl
blocks in the same way as in the Julia REPL and @example
blocks.
```@repl
a = 1
b = 2
a + b
```
will generate
```julia
julia> a = 1
1
julia> b = 2
2
julia> a + b
3
```
Named @repl <name>
blocks behave in the same way as named @example <name>
blocks.
The working directory, pwd
, is set to the directory in build
where the file will be written to, and the paths in include
calls are interpreted to be relative to pwd
. This can be customized with the workdir
keyword of makedocs
.
@setup <name>
block
These are similar to @example
blocks, but both the input and output are hidden from the final document. This can be convenient if there are several lines of setup code that need to be hidden.
Unlike @example
and @repl
blocks, @setup
requires a <name>
attribute to associate it with downstream @example <name>
and @repl <name>
blocks.
```@setup abc
using RDatasets
using DataFrames
iris = dataset("datasets", "iris")
```
```@example abc
println(iris)
```
@eval
block
Evaluates the contents of the block and inserts the resulting value into the final document.
In the following example we use the PyPlot package to generate a plot and display it in the final document.
```@eval
using PyPlot
x = linspace(-π, π)
y = sin(x)
plot(x, y, color = "red")
savefig("plot.svg")
nothing
```
![](plot.svg)
Another example is to generate markdown tables from machine readable data formats such as CSV or JSON.
```@eval
using CSV
using Latexify
df = CSV.read("table.csv")
mdtable(df,latex=false)
```
Which will generate a markdown version of the CSV file table.csv and render it in the output format.
Note that each @eval
block evaluates its contents within a separate module. When evaluating each block the present working directory, pwd
, is set to the directory in build
where the file will be written to, and the paths in include
calls are interpreted to be relative to pwd
.
Also, instead of returning nothing
in the example above we could have returned a new Markdown.MD
object through Markdown.parse
. This can be more appropriate when the filename is not known until evaluation of the block itself.
In most cases @example
is preferred over @eval
. Just like in normal Julia code where eval
should be only be considered as a last resort, @eval
should be treated in the same way.
@raw <format>
block
Allows code to be inserted into the final document verbatim. E.g. to insert custom HTML or LaTeX code into the output.
The format
argument is mandatory and Documenter uses it to determine whether a particular block should be copied over to the output or not. Currently supported formats are html
and latex
, used by the respective writers. A @raw
block whose format
is not recognized is usually ignored, so it is possible to have a raw block for each output format without the blocks being duplicated in the output.
The following example shows how SVG code with custom styling can be included into documents using the @raw
block.
```@raw html
<svg style="display: block; margin: 0 auto;" width="5em" heigth="5em">
<circle cx="2.5em" cy="2.5em" r="2em" stroke="black" stroke-width=".1em" fill="red" />
</svg>
```
It will show up as follows, with code having been copied over verbatim to the HTML file.